Docling/docling/backend/msexcel_backend.py
Peter W. J. Staar a458e298ca
fix: added extraction of byte-images in excel (#804)
* fix(msexcel): ignore Mypy checking for _find_images_in_sheet function

Signed-off-by: Jiun An Tsai <andrew@247365-Macbook.local>

* fixed some issues

Signed-off-by: Peter Staar <taa@zurich.ibm.com>

* reformatted the code

Signed-off-by: Peter Staar <taa@zurich.ibm.com>

* pinned pillow in pyproject

Signed-off-by: Peter Staar <taa@zurich.ibm.com>

---------

Signed-off-by: Jiun An Tsai <andrew@247365-Macbook.local>
Signed-off-by: Peter Staar <taa@zurich.ibm.com>
Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>
Co-authored-by: Jiun An Tsai <andrew@247365-Macbook.local>
Co-authored-by: Michele Dolfi <dol@zurich.ibm.com>
2025-01-24 18:48:02 +01:00

387 lines
12 KiB
Python

import logging
from io import BytesIO
from pathlib import Path
from typing import Dict, Set, Tuple, Union
from docling_core.types.doc import (
DoclingDocument,
DocumentOrigin,
GroupLabel,
ImageRef,
TableCell,
TableData,
)
# from lxml import etree
from openpyxl import Workbook, load_workbook
from openpyxl.cell.cell import Cell
from openpyxl.drawing.image import Image
from openpyxl.worksheet.worksheet import Worksheet
from docling.backend.abstract_backend import DeclarativeDocumentBackend
from docling.datamodel.base_models import InputFormat
from docling.datamodel.document import InputDocument
_log = logging.getLogger(__name__)
from typing import Any, List
from PIL import Image as PILImage
from pydantic import BaseModel
class ExcelCell(BaseModel):
row: int
col: int
text: str
row_span: int
col_span: int
class ExcelTable(BaseModel):
num_rows: int
num_cols: int
data: List[ExcelCell]
class MsExcelDocumentBackend(DeclarativeDocumentBackend):
def __init__(self, in_doc: "InputDocument", path_or_stream: Union[BytesIO, Path]):
super().__init__(in_doc, path_or_stream)
# Initialise the parents for the hierarchy
self.max_levels = 10
self.parents: Dict[int, Any] = {}
for i in range(-1, self.max_levels):
self.parents[i] = None
self.workbook = None
try:
if isinstance(self.path_or_stream, BytesIO):
self.workbook = load_workbook(filename=self.path_or_stream)
elif isinstance(self.path_or_stream, Path):
self.workbook = load_workbook(filename=str(self.path_or_stream))
self.valid = True
except Exception as e:
self.valid = False
raise RuntimeError(
f"MsPowerpointDocumentBackend could not load document with hash {self.document_hash}"
) from e
def is_valid(self) -> bool:
_log.info(f"valid: {self.valid}")
return self.valid
@classmethod
def supports_pagination(cls) -> bool:
return True
def unload(self):
if isinstance(self.path_or_stream, BytesIO):
self.path_or_stream.close()
self.path_or_stream = None
@classmethod
def supported_formats(cls) -> Set[InputFormat]:
return {InputFormat.XLSX}
def convert(self) -> DoclingDocument:
# Parses the XLSX into a structured document model.
origin = DocumentOrigin(
filename=self.file.name or "file.xlsx",
mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
binary_hash=self.document_hash,
)
doc = DoclingDocument(name=self.file.stem or "file.xlsx", origin=origin)
if self.is_valid():
doc = self._convert_workbook(doc)
else:
raise RuntimeError(
f"Cannot convert doc with {self.document_hash} because the backend failed to init."
)
return doc
def _convert_workbook(self, doc: DoclingDocument) -> DoclingDocument:
if self.workbook is not None:
# Iterate over all sheets
for sheet_name in self.workbook.sheetnames:
_log.info(f"Processing sheet: {sheet_name}")
# Access the sheet by name
sheet = self.workbook[sheet_name]
self.parents[0] = doc.add_group(
parent=None,
label=GroupLabel.SECTION,
name=f"sheet: {sheet_name}",
)
doc = self._convert_sheet(doc, sheet)
else:
_log.error("Workbook is not initialized.")
return doc
def _convert_sheet(self, doc: DoclingDocument, sheet: Worksheet):
doc = self._find_tables_in_sheet(doc, sheet)
doc = self._find_images_in_sheet(doc, sheet)
return doc
def _find_tables_in_sheet(self, doc: DoclingDocument, sheet: Worksheet):
tables = self._find_data_tables(sheet)
for excel_table in tables:
num_rows = excel_table.num_rows
num_cols = excel_table.num_cols
table_data = TableData(
num_rows=num_rows,
num_cols=num_cols,
table_cells=[],
)
for excel_cell in excel_table.data:
cell = TableCell(
text=excel_cell.text,
row_span=excel_cell.row_span,
col_span=excel_cell.col_span,
start_row_offset_idx=excel_cell.row,
end_row_offset_idx=excel_cell.row + excel_cell.row_span,
start_col_offset_idx=excel_cell.col,
end_col_offset_idx=excel_cell.col + excel_cell.col_span,
col_header=False,
row_header=False,
)
table_data.table_cells.append(cell)
doc.add_table(data=table_data, parent=self.parents[0])
return doc
def _find_data_tables(self, sheet: Worksheet):
"""
Find all compact rectangular data tables in a sheet.
"""
# _log.info("find_data_tables")
tables = [] # List to store found tables
visited: set[Tuple[int, int]] = set() # Track already visited cells
# Iterate over all cells in the sheet
for ri, row in enumerate(sheet.iter_rows(values_only=False)):
for rj, cell in enumerate(row):
# Skip empty or already visited cells
if cell.value is None or (ri, rj) in visited:
continue
# If the cell starts a new table, find its bounds
table_bounds, visited_cells = self._find_table_bounds(
sheet, ri, rj, visited
)
visited.update(visited_cells) # Mark these cells as visited
tables.append(table_bounds)
return tables
def _find_table_bounds(
self,
sheet: Worksheet,
start_row: int,
start_col: int,
visited: set[Tuple[int, int]],
):
"""
Determine the bounds of a compact rectangular table.
Returns:
- A dictionary with the bounds and data.
- A set of visited cell coordinates.
"""
_log.info("find_table_bounds")
max_row = self._find_table_bottom(sheet, start_row, start_col)
max_col = self._find_table_right(sheet, start_row, start_col)
# Collect the data within the bounds
data = []
visited_cells = set()
for ri in range(start_row, max_row + 1):
for rj in range(start_col, max_col + 1):
cell = sheet.cell(row=ri + 1, column=rj + 1) # 1-based indexing
# Check if the cell belongs to a merged range
row_span = 1
col_span = 1
# _log.info(sheet.merged_cells.ranges)
for merged_range in sheet.merged_cells.ranges:
if (
merged_range.min_row <= ri + 1
and ri + 1 <= merged_range.max_row
and merged_range.min_col <= rj + 1
and rj + 1 <= merged_range.max_col
):
row_span = merged_range.max_row - merged_range.min_row + 1
col_span = merged_range.max_col - merged_range.min_col + 1
break
if (ri, rj) not in visited_cells:
data.append(
ExcelCell(
row=ri - start_row,
col=rj - start_col,
text=str(cell.value),
row_span=row_span,
col_span=col_span,
)
)
# _log.info(f"cell: {ri}, {rj} -> {ri - start_row}, {rj - start_col}, {row_span}, {col_span}: {str(cell.value)}")
# Mark all cells in the span as visited
for span_row in range(ri, ri + row_span):
for span_col in range(rj, rj + col_span):
visited_cells.add((span_row, span_col))
return (
ExcelTable(
num_rows=max_row + 1 - start_row,
num_cols=max_col + 1 - start_col,
data=data,
),
visited_cells,
)
def _find_table_bottom(self, sheet: Worksheet, start_row: int, start_col: int):
"""Function to find the bottom boundary of the table"""
max_row = start_row
while max_row < sheet.max_row - 1:
# Get the cell value or check if it is part of a merged cell
cell = sheet.cell(row=max_row + 2, column=start_col + 1)
# Check if the cell is part of a merged range
merged_range = next(
(mr for mr in sheet.merged_cells.ranges if cell.coordinate in mr),
None,
)
if cell.value is None and not merged_range:
break # Stop if the cell is empty and not merged
# Expand max_row to include the merged range if applicable
if merged_range:
max_row = max(max_row, merged_range.max_row - 1)
else:
max_row += 1
return max_row
def _find_table_right(self, sheet: Worksheet, start_row: int, start_col: int):
"""Function to find the right boundary of the table"""
max_col = start_col
while max_col < sheet.max_column - 1:
# Get the cell value or check if it is part of a merged cell
cell = sheet.cell(row=start_row + 1, column=max_col + 2)
# Check if the cell is part of a merged range
merged_range = next(
(mr for mr in sheet.merged_cells.ranges if cell.coordinate in mr),
None,
)
if cell.value is None and not merged_range:
break # Stop if the cell is empty and not merged
# Expand max_col to include the merged range if applicable
if merged_range:
max_col = max(max_col, merged_range.max_col - 1)
else:
max_col += 1
return max_col
def _find_images_in_sheet(
self, doc: DoclingDocument, sheet: Worksheet
) -> DoclingDocument:
# Iterate over byte images in the sheet
for idx, image in enumerate(sheet._images): # type: ignore
try:
pil_image = PILImage.open(image.ref)
doc.add_picture(
parent=self.parents[0],
image=ImageRef.from_pil(image=pil_image, dpi=72),
caption=None,
)
except:
_log.error("could not extract the image from excel sheets")
"""
for idx, chart in enumerate(sheet._charts): # type: ignore
try:
chart_path = f"chart_{idx + 1}.png"
_log.info(
f"Chart found, but dynamic rendering is required for: {chart_path}"
)
_log.info(f"Chart {idx + 1}:")
# Chart type
# _log.info(f"Type: {type(chart).__name__}")
print(f"Type: {type(chart).__name__}")
# Extract series data
for series_idx, series in enumerate(chart.series):
#_log.info(f"Series {series_idx + 1}:")
print(f"Series {series_idx + 1} type: {type(series).__name__}")
#print(f"x-values: {series.xVal}")
#print(f"y-values: {series.yVal}")
print(f"xval type: {type(series.xVal).__name__}")
xvals = []
for _ in series.xVal.numLit.pt:
print(f"xval type: {type(_).__name__}")
if hasattr(_, 'v'):
xvals.append(_.v)
print(f"x-values: {xvals}")
yvals = []
for _ in series.yVal:
if hasattr(_, 'v'):
yvals.append(_.v)
print(f"y-values: {yvals}")
except Exception as exc:
print(exc)
continue
"""
return doc