
* updated the render_as_doctags with the new arguments from docling-core Signed-off-by: Peter Staar <taa@zurich.ibm.com> * ensuring that docling-core is >1.5.0 to accomodate with the latest export-to-doctags parameters Signed-off-by: Peter Staar <taa@zurich.ibm.com> * added the doctags tests Signed-off-by: Peter Staar <taa@zurich.ibm.com> * updated the README Signed-off-by: Peter Staar <taa@zurich.ibm.com> * fix poetry lock Signed-off-by: Michele Dolfi <dol@zurich.ibm.com> * Fix formatting problems Signed-off-by: Christoph Auer <cau@zurich.ibm.com> * fixed the doctag export in docling/utils/export.py Signed-off-by: Peter Staar <taa@zurich.ibm.com> * propagate xsize and ysize Signed-off-by: Michele Dolfi <dol@zurich.ibm.com> --------- Signed-off-by: Peter Staar <taa@zurich.ibm.com> Signed-off-by: Michele Dolfi <dol@zurich.ibm.com> Signed-off-by: Christoph Auer <cau@zurich.ibm.com> Co-authored-by: Michele Dolfi <dol@zurich.ibm.com> Co-authored-by: Christoph Auer <cau@zurich.ibm.com>
459 lines
16 KiB
Python
459 lines
16 KiB
Python
import logging
|
|
from io import BytesIO
|
|
from pathlib import Path, PurePath
|
|
from typing import ClassVar, Dict, Iterable, List, Optional, Tuple, Type, Union
|
|
|
|
from docling_core.types import BaseCell, BaseText
|
|
from docling_core.types import BoundingBox as DsBoundingBox
|
|
from docling_core.types import Document as DsDocument
|
|
from docling_core.types import DocumentDescription as DsDocumentDescription
|
|
from docling_core.types import FileInfoObject as DsFileInfoObject
|
|
from docling_core.types import PageDimensions, PageReference, Prov, Ref
|
|
from docling_core.types import Table as DsSchemaTable
|
|
from docling_core.types import TableCell
|
|
from docling_core.types.doc.base import Figure
|
|
from pydantic import BaseModel
|
|
from typing_extensions import deprecated
|
|
|
|
from docling.backend.abstract_backend import PdfDocumentBackend
|
|
from docling.backend.docling_parse_backend import DoclingParseDocumentBackend
|
|
from docling.datamodel.base_models import (
|
|
AssembledUnit,
|
|
ConversionStatus,
|
|
DocumentStream,
|
|
ErrorItem,
|
|
FigureElement,
|
|
Page,
|
|
PageElement,
|
|
TableElement,
|
|
TextElement,
|
|
)
|
|
from docling.datamodel.settings import DocumentLimits
|
|
from docling.utils.utils import create_file_hash
|
|
|
|
_log = logging.getLogger(__name__)
|
|
|
|
layout_label_to_ds_type = {
|
|
"Title": "title",
|
|
"Document Index": "table-of-path_or_stream",
|
|
"Section-header": "subtitle-level-1",
|
|
"Checkbox-Selected": "checkbox-selected",
|
|
"Checkbox-Unselected": "checkbox-unselected",
|
|
"Caption": "caption",
|
|
"Page-header": "page-header",
|
|
"Page-footer": "page-footer",
|
|
"Footnote": "footnote",
|
|
"Table": "table",
|
|
"Formula": "equation",
|
|
"List-item": "paragraph",
|
|
"Code": "paragraph",
|
|
"Picture": "figure",
|
|
"Text": "paragraph",
|
|
}
|
|
|
|
_EMPTY_DOC = DsDocument(
|
|
_name="",
|
|
description=DsDocumentDescription(logs=[]),
|
|
file_info=DsFileInfoObject(
|
|
filename="",
|
|
document_hash="",
|
|
),
|
|
)
|
|
|
|
|
|
class InputDocument(BaseModel):
|
|
file: PurePath = None
|
|
document_hash: Optional[str] = None
|
|
valid: bool = False
|
|
limits: DocumentLimits = DocumentLimits()
|
|
|
|
filesize: Optional[int] = None
|
|
page_count: Optional[int] = None
|
|
|
|
_backend: PdfDocumentBackend = None # Internal PDF backend used
|
|
|
|
def __init__(
|
|
self,
|
|
path_or_stream: Union[BytesIO, Path],
|
|
filename: Optional[str] = None,
|
|
limits: Optional[DocumentLimits] = None,
|
|
pdf_backend=DoclingParseDocumentBackend,
|
|
):
|
|
super().__init__()
|
|
|
|
self.limits = limits or DocumentLimits()
|
|
|
|
try:
|
|
if isinstance(path_or_stream, Path):
|
|
self.file = path_or_stream
|
|
self.filesize = path_or_stream.stat().st_size
|
|
if self.filesize > self.limits.max_file_size:
|
|
self.valid = False
|
|
else:
|
|
self.document_hash = create_file_hash(path_or_stream)
|
|
self._backend = pdf_backend(
|
|
path_or_stream=path_or_stream, document_hash=self.document_hash
|
|
)
|
|
|
|
elif isinstance(path_or_stream, BytesIO):
|
|
self.file = PurePath(filename)
|
|
self.filesize = path_or_stream.getbuffer().nbytes
|
|
|
|
if self.filesize > self.limits.max_file_size:
|
|
self.valid = False
|
|
else:
|
|
self.document_hash = create_file_hash(path_or_stream)
|
|
self._backend = pdf_backend(
|
|
path_or_stream=path_or_stream, document_hash=self.document_hash
|
|
)
|
|
|
|
if self.document_hash and self._backend.page_count() > 0:
|
|
self.page_count = self._backend.page_count()
|
|
|
|
if self.page_count <= self.limits.max_num_pages:
|
|
self.valid = True
|
|
|
|
except (FileNotFoundError, OSError) as e:
|
|
_log.exception(
|
|
f"File {self.file.name} not found or cannot be opened.", exc_info=e
|
|
)
|
|
# raise
|
|
except RuntimeError as e:
|
|
_log.exception(
|
|
f"An unexpected error occurred while opening the document {self.file.name}",
|
|
exc_info=e,
|
|
)
|
|
# raise
|
|
|
|
|
|
@deprecated("Use `ConversionResult` instead.")
|
|
class ConvertedDocument(BaseModel):
|
|
input: InputDocument
|
|
|
|
status: ConversionStatus = ConversionStatus.PENDING # failure, success
|
|
errors: List[ErrorItem] = [] # structure to keep errors
|
|
|
|
pages: List[Page] = []
|
|
assembled: AssembledUnit = AssembledUnit()
|
|
|
|
output: DsDocument = _EMPTY_DOC
|
|
|
|
def _to_ds_document(self) -> DsDocument:
|
|
title = ""
|
|
desc = DsDocumentDescription(logs=[])
|
|
|
|
page_hashes = [
|
|
PageReference(hash=p.page_hash, page=p.page_no + 1, model="default")
|
|
for p in self.pages
|
|
]
|
|
|
|
file_info = DsFileInfoObject(
|
|
filename=self.input.file.name,
|
|
document_hash=self.input.document_hash,
|
|
num_pages=self.input.page_count,
|
|
page_hashes=page_hashes,
|
|
)
|
|
|
|
main_text = []
|
|
tables = []
|
|
figures = []
|
|
|
|
page_no_to_page = {p.page_no: p for p in self.pages}
|
|
|
|
for element in self.assembled.elements:
|
|
# Convert bboxes to lower-left origin.
|
|
target_bbox = DsBoundingBox(
|
|
element.cluster.bbox.to_bottom_left_origin(
|
|
page_no_to_page[element.page_no].size.height
|
|
).as_tuple()
|
|
)
|
|
|
|
if isinstance(element, TextElement):
|
|
main_text.append(
|
|
BaseText(
|
|
text=element.text,
|
|
obj_type=layout_label_to_ds_type.get(element.label),
|
|
name=element.label,
|
|
prov=[
|
|
Prov(
|
|
bbox=target_bbox,
|
|
page=element.page_no + 1,
|
|
span=[0, len(element.text)],
|
|
)
|
|
],
|
|
)
|
|
)
|
|
elif isinstance(element, TableElement):
|
|
index = len(tables)
|
|
ref_str = f"#/tables/{index}"
|
|
main_text.append(
|
|
Ref(
|
|
name=element.label,
|
|
obj_type=layout_label_to_ds_type.get(element.label),
|
|
ref=ref_str,
|
|
),
|
|
)
|
|
|
|
# Initialise empty table data grid (only empty cells)
|
|
table_data = [
|
|
[
|
|
TableCell(
|
|
text="",
|
|
# bbox=[0,0,0,0],
|
|
spans=[[i, j]],
|
|
obj_type="body",
|
|
)
|
|
for j in range(element.num_cols)
|
|
]
|
|
for i in range(element.num_rows)
|
|
]
|
|
|
|
# Overwrite cells in table data for which there is actual cell content.
|
|
for cell in element.table_cells:
|
|
for i in range(
|
|
min(cell.start_row_offset_idx, element.num_rows),
|
|
min(cell.end_row_offset_idx, element.num_rows),
|
|
):
|
|
for j in range(
|
|
min(cell.start_col_offset_idx, element.num_cols),
|
|
min(cell.end_col_offset_idx, element.num_cols),
|
|
):
|
|
celltype = "body"
|
|
if cell.column_header:
|
|
celltype = "col_header"
|
|
elif cell.row_header:
|
|
celltype = "row_header"
|
|
elif cell.row_section:
|
|
celltype = "row_section"
|
|
|
|
def make_spans(cell):
|
|
for rspan in range(
|
|
min(cell.start_row_offset_idx, element.num_rows),
|
|
min(cell.end_row_offset_idx, element.num_rows),
|
|
):
|
|
for cspan in range(
|
|
min(
|
|
cell.start_col_offset_idx, element.num_cols
|
|
),
|
|
min(cell.end_col_offset_idx, element.num_cols),
|
|
):
|
|
yield [rspan, cspan]
|
|
|
|
spans = list(make_spans(cell))
|
|
table_data[i][j] = TableCell(
|
|
text=cell.text,
|
|
bbox=cell.bbox.to_bottom_left_origin(
|
|
page_no_to_page[element.page_no].size.height
|
|
).as_tuple(),
|
|
# col=j,
|
|
# row=i,
|
|
spans=spans,
|
|
obj_type=celltype,
|
|
# col_span=[cell.start_col_offset_idx, cell.end_col_offset_idx],
|
|
# row_span=[cell.start_row_offset_idx, cell.end_row_offset_idx]
|
|
)
|
|
|
|
tables.append(
|
|
DsSchemaTable(
|
|
num_cols=element.num_cols,
|
|
num_rows=element.num_rows,
|
|
obj_type=layout_label_to_ds_type.get(element.label),
|
|
data=table_data,
|
|
prov=[
|
|
Prov(
|
|
bbox=target_bbox,
|
|
page=element.page_no + 1,
|
|
span=[0, 0],
|
|
)
|
|
],
|
|
)
|
|
)
|
|
|
|
elif isinstance(element, FigureElement):
|
|
index = len(figures)
|
|
ref_str = f"#/figures/{index}"
|
|
main_text.append(
|
|
Ref(
|
|
name=element.label,
|
|
obj_type=layout_label_to_ds_type.get(element.label),
|
|
ref=ref_str,
|
|
),
|
|
)
|
|
figures.append(
|
|
Figure(
|
|
prov=[
|
|
Prov(
|
|
bbox=target_bbox,
|
|
page=element.page_no + 1,
|
|
span=[0, 0],
|
|
)
|
|
],
|
|
obj_type=layout_label_to_ds_type.get(element.label),
|
|
# data=[[]],
|
|
)
|
|
)
|
|
|
|
page_dimensions = [
|
|
PageDimensions(page=p.page_no + 1, height=p.size.height, width=p.size.width)
|
|
for p in self.pages
|
|
]
|
|
|
|
ds_doc = DsDocument(
|
|
name=title,
|
|
description=desc,
|
|
file_info=file_info,
|
|
main_text=main_text,
|
|
tables=tables,
|
|
figures=figures,
|
|
page_dimensions=page_dimensions,
|
|
)
|
|
|
|
return ds_doc
|
|
|
|
def render_as_dict(self):
|
|
return self.output.model_dump(by_alias=True, exclude_none=True)
|
|
|
|
def render_as_markdown(
|
|
self,
|
|
delim: str = "\n\n",
|
|
main_text_start: int = 0,
|
|
main_text_stop: Optional[int] = None,
|
|
main_text_labels: list[str] = [
|
|
"title",
|
|
"subtitle-level-1",
|
|
"paragraph",
|
|
"caption",
|
|
"table",
|
|
],
|
|
strict_text: bool = False,
|
|
):
|
|
return self.output.export_to_markdown(
|
|
delim=delim,
|
|
main_text_start=main_text_start,
|
|
main_text_stop=main_text_stop,
|
|
main_text_labels=main_text_labels,
|
|
strict_text=strict_text,
|
|
)
|
|
|
|
def render_as_text(
|
|
self,
|
|
delim: str = "\n\n",
|
|
main_text_start: int = 0,
|
|
main_text_stop: Optional[int] = None,
|
|
main_text_labels: list[str] = [
|
|
"title",
|
|
"subtitle-level-1",
|
|
"paragraph",
|
|
"caption",
|
|
],
|
|
):
|
|
return self.output.export_to_markdown(
|
|
delim=delim,
|
|
main_text_start=main_text_start,
|
|
main_text_stop=main_text_stop,
|
|
main_text_labels=main_text_labels,
|
|
strict_text=True,
|
|
)
|
|
|
|
def render_as_doctags(
|
|
self,
|
|
delim: str = "\n\n",
|
|
main_text_start: int = 0,
|
|
main_text_stop: Optional[int] = None,
|
|
main_text_labels: list[str] = [
|
|
"title",
|
|
"subtitle-level-1",
|
|
"paragraph",
|
|
"caption",
|
|
"table",
|
|
"figure",
|
|
],
|
|
xsize: int = 100,
|
|
ysize: int = 100,
|
|
add_location: bool = True,
|
|
add_content: bool = True,
|
|
add_page_index: bool = True,
|
|
# table specific flags
|
|
add_table_cell_location: bool = False,
|
|
add_table_cell_label: bool = True,
|
|
add_table_cell_text: bool = True,
|
|
) -> str:
|
|
return self.output.export_to_document_tokens(
|
|
delim=delim,
|
|
main_text_start=main_text_start,
|
|
main_text_stop=main_text_stop,
|
|
main_text_labels=main_text_labels,
|
|
xsize=xsize,
|
|
ysize=ysize,
|
|
add_location=add_location,
|
|
add_content=add_content,
|
|
add_page_index=add_page_index,
|
|
# table specific flags
|
|
add_table_cell_location=add_table_cell_location,
|
|
add_table_cell_label=add_table_cell_label,
|
|
add_table_cell_text=add_table_cell_text,
|
|
)
|
|
|
|
def render_element_images(
|
|
self, element_types: Tuple[PageElement] = (FigureElement,)
|
|
):
|
|
for element in self.assembled.elements:
|
|
if isinstance(element, element_types):
|
|
page_ix = element.page_no
|
|
scale = self.pages[page_ix]._default_image_scale
|
|
crop_bbox = element.cluster.bbox.scaled(scale=scale).to_top_left_origin(
|
|
page_height=self.pages[page_ix].size.height * scale
|
|
)
|
|
|
|
cropped_im = self.pages[page_ix].image.crop(crop_bbox.as_tuple())
|
|
yield element, cropped_im
|
|
|
|
|
|
class ConversionResult(ConvertedDocument):
|
|
pass
|
|
|
|
|
|
class DocumentConversionInput(BaseModel):
|
|
|
|
_path_or_stream_iterator: Iterable[Union[Path, DocumentStream]] = None
|
|
limits: Optional[DocumentLimits] = DocumentLimits()
|
|
|
|
DEFAULT_BACKEND: ClassVar = DoclingParseDocumentBackend
|
|
|
|
def docs(
|
|
self, pdf_backend: Optional[Type[PdfDocumentBackend]] = None
|
|
) -> Iterable[InputDocument]:
|
|
|
|
pdf_backend = pdf_backend or DocumentConversionInput.DEFAULT_BACKEND
|
|
|
|
for obj in self._path_or_stream_iterator:
|
|
if isinstance(obj, Path):
|
|
yield InputDocument(
|
|
path_or_stream=obj, limits=self.limits, pdf_backend=pdf_backend
|
|
)
|
|
elif isinstance(obj, DocumentStream):
|
|
yield InputDocument(
|
|
path_or_stream=obj.stream,
|
|
filename=obj.filename,
|
|
limits=self.limits,
|
|
pdf_backend=pdf_backend,
|
|
)
|
|
|
|
@classmethod
|
|
def from_paths(cls, paths: Iterable[Path], limits: Optional[DocumentLimits] = None):
|
|
paths = [Path(p) for p in paths]
|
|
|
|
doc_input = cls(limits=limits)
|
|
doc_input._path_or_stream_iterator = paths
|
|
|
|
return doc_input
|
|
|
|
@classmethod
|
|
def from_streams(
|
|
cls, streams: Iterable[DocumentStream], limits: Optional[DocumentLimits] = None
|
|
):
|
|
doc_input = cls(limits=limits)
|
|
doc_input._path_or_stream_iterator = streams
|
|
|
|
return doc_input
|